[?25l:: Synchronizing package databases... build-support-manual  build-support-manual is up to date build-support  build-support is up to date staging  staging is up to date core-staging  core-staging is up to date extra-staging  extra-staging is up to date testing  testing is up to date core-testing  core-testing is up to date core  core is up to date extra-testing  extra-testing is up to date extra  extra is up to date:: Starting full system upgrade... there is nothing to do [?25h==> Building in chroot for [extra-staging-with-build-support] (i686)... ==> Synchronizing chroot copy [/var/lib/archbuild1/extra-staging-with-build-support-i686/root] -> [builder1]...done ==> Making package: netcdf-openmpi 4.9.2-6.0 (2024-09-09T20:20:52 UTC) ==> Retrieving sources... -> Found netcdf-openmpi-4.9.2.tar.gz ==> Validating source files with sha256sums... netcdf-openmpi-4.9.2.tar.gz ... Passed gpg: Warning: using insecure memory! ==> Appending keys from archlinux32.gpg... gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! gpg: Warning: using insecure memory! ==> Updating trust database... gpg: Warning: using insecure memory! gpg: next trustdb check due at 2024-11-09 ==> Making package: netcdf-openmpi 4.9.2-6.0 (Mon Sep 9 20:20:58 2024) ==> Checking runtime dependencies... ==> Installing missing dependencies... [?25lresolving dependencies... looking for conflicting packages... Packages (9) hwloc-2.11.1-1.0 libaec-1.1.3-1.0 libedit-20240517_3.1-1.0 libnl-3.10.0-1.1 libpciaccess-0.18.1-2.0 openmpi-4.0.5-2.0 openssh-9.8p1-1.1 hdf5-openmpi-1.14.4.3-1.0 libzip-1.10.1-2.0 Total Installed Size: 31.82 MiB :: Proceed with installation? 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(1/9) installing libaec [----------------------] 0% (1/9) installing libaec [######################] 100% (2/9) installing libpciaccess [----------------------] 0% (2/9) installing libpciaccess [######################] 100% (3/9) installing hwloc [----------------------] 0% (3/9) installing hwloc [######################] 100% Optional dependencies for hwloc cairo: PDF, Postscript, and PNG export support libxml2: full XML import/export support [installed] (4/9) installing libedit [----------------------] 0% (4/9) installing libedit [######################] 100% (5/9) installing openssh [----------------------] 0% (5/9) installing openssh [######################] 100% Optional dependencies for openssh libfido2: FIDO/U2F support sh: for ssh-copy-id and findssl.sh [installed] x11-ssh-askpass: input passphrase in X xorg-xauth: X11 forwarding (6/9) installing libnl [----------------------] 0% (6/9) installing libnl [######################] 100% (7/9) installing openmpi [----------------------] 0% (7/9) installing openmpi [######################] 100% Optional dependencies for openmpi gcc-fortran: fortran support (8/9) installing hdf5-openmpi [----------------------] 0% (8/9) installing hdf5-openmpi [######################] 100% (9/9) installing libzip [----------------------] 0% (9/9) installing libzip [######################] 100% [?25h==> Checking buildtime dependencies... ==> Installing missing dependencies... [?25lresolving dependencies... looking for conflicting packages... Packages (8) cppdap-1.58.0-2.0 hicolor-icon-theme-0.18-1.0 jsoncpp-1.9.5-3.0 libuv-1.48.0-2.1 rhash-1.4.4-1.0 cmake-3.30.3-1.0 inetutils-2.5-1.0 unzip-6.0-21.0 Total Installed Size: 79.46 MiB :: Proceed with installation? 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(1/8) installing cppdap [----------------------] 0% (1/8) installing cppdap [######################] 100% (2/8) installing hicolor-icon-theme [----------------------] 0% (2/8) installing hicolor-icon-theme [######################] 100% (3/8) installing jsoncpp [----------------------] 0% (3/8) installing jsoncpp [######################] 100% Optional dependencies for jsoncpp jsoncpp-doc: documentation (4/8) installing libuv [----------------------] 0% (4/8) installing libuv [######################] 100% (5/8) installing rhash [----------------------] 0% (5/8) installing rhash [######################] 100% (6/8) installing cmake [----------------------] 0% (6/8) installing cmake [----------------------] 0% (6/8) installing cmake [----------------------] 0% (6/8) installing cmake [######################] 100% Optional dependencies for cmake make: for unix Makefile generator [installed] ninja: for ninja generator qt6-base: cmake-gui (7/8) installing inetutils [----------------------] 0% (7/8) installing inetutils [######################] 100% (8/8) installing unzip [----------------------] 0% (8/8) installing unzip [######################] 100% :: Running post-transaction hooks... (1/1) Updating the info directory file... [?25h==> Retrieving sources... -> Found netcdf-openmpi-4.9.2.tar.gz ==> WARNING: Skipping all source file integrity checks. ==> Extracting sources... -> Extracting netcdf-openmpi-4.9.2.tar.gz with bsdtar ==> Starting prepare()... ==> Starting build()... -- The C compiler identification is GNU 14.2.1 -- The CXX compiler identification is GNU 14.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/mpicc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at CMakeLists.txt:54 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. Call Stack (most recent call first): CMakeLists.txt:56 (getuname) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:54 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. Call Stack (most recent call first): CMakeLists.txt:57 (getuname) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:54 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. Call Stack (most recent call first): CMakeLists.txt:58 (getuname) This warning is for project developers. Use -Wno-dev to suppress it. -- Performing Test LIBTOOL_HAS_NO_UNDEFINED -- Performing Test LIBTOOL_HAS_NO_UNDEFINED - Success -- Performing Test CC_HAS_WCONVERSION -- Performing Test CC_HAS_WCONVERSION - Success -- Performing Test CC_HAS_SHORTEN_64_32 -- Performing Test CC_HAS_SHORTEN_64_32 - Failed -- Found HDF5: /usr/lib/libhdf5.so;/usr/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.a;/usr/lib/libm.so (found version "1.14.4-3") found components: C HL -- Using HDF5 include dir: /usr/include -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test HAVE_HDF5_ZLIB -- Performing Test HAVE_HDF5_ZLIB - Success -- Found ZLIB: /usr/lib/libz.so (found version "1.3.1") -- HDF5 has zlib. -- Performing Test USE_HDF5_SZIP -- Performing Test USE_HDF5_SZIP - Success -- HDF5_UTF8_PATHS (HDF5 version 1.10.6+): ON -- Looking for H5Pget_fapl_mpio in /usr/lib/libhdf5.so -- Looking for H5Pget_fapl_mpio in /usr/lib/libhdf5.so - found -- Looking for H5Pset_all_coll_metadata_ops in /usr/lib/libhdf5.so -- Looking for H5Pset_all_coll_metadata_ops in /usr/lib/libhdf5.so - found -- Looking for H5Dread_chunk in /usr/lib/libhdf5.so -- Looking for H5Dread_chunk in /usr/lib/libhdf5.so - found -- Looking for H5Pset_fapl_ros3 in /usr/lib/libhdf5.so -- Looking for H5Pset_fapl_ros3 in /usr/lib/libhdf5.so - not found -- Found CURL: /usr/lib/libcurl.so (found version "8.9.1") -- Performing Test HAVE_LIBCURL_766 -- Performing Test HAVE_LIBCURL_766 - Success -- Enabling DAP4 -- Found Math library: /usr/lib/libm.so -- Found Szip: headers at /usr/include, libraries at /usr/lib -- library is /usr/lib/libsz.so -- Found Bz2: headers at /usr/include, libraries at /usr/lib -- library is /usr/lib/libbz2.so -- Found Zstd: headers at /usr/include, libraries at /usr/lib -- library is /usr/lib/libzstd.so >>> Standard Filter: szip >>> Standard Filter: zstd >>> Standard Filter: bz2 -- Found LibXml2: /usr/lib/libxml2.so (found version "2.13.3") CMake Warning (dev) at CMakeLists.txt:1388 (EXEC_PROGRAM): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. This warning is for project developers. Use -Wno-dev to suppress it. -- Found MPI_C: /usr/bin/mpicc (found version "3.1") -- Found MPI_CXX: /usr/lib/openmpi/libmpi_cxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Enabling use of fill value when NC_ERANGE -- Enabling a more relaxed check for NC_EINVALCOORDS -- Looking for math.h -- Looking for math.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for alloca.h -- Looking for alloca.h - found -- Looking for malloc.h -- Looking for malloc.h - found -- Looking for fcntl.h -- Looking for fcntl.h - found -- Looking for getopt.h -- Looking for getopt.h - found -- Looking for locale.h -- Looking for locale.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stdio.h -- Looking for stdio.h - found -- Looking for stdlib.h -- Looking for stdlib.h - found -- Looking for stdarg.h -- Looking for stdarg.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for signal.h -- Looking for signal.h - found -- Looking for sys/param.h -- Looking for sys/param.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Looking for sys/time.h -- Looking for sys/time.h - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for sys/mman.h -- Looking for sys/mman.h - found -- Looking for sys/resource.h -- Looking for sys/resource.h - found -- Looking for inttypes.h -- Looking for inttypes.h - found -- Looking for pstdint.h -- Looking for pstdint.h - not found -- Looking for endian.h -- Looking for endian.h - found -- Looking for BaseTsd.h -- Looking for BaseTsd.h - not found -- Looking for stddef.h -- Looking for stddef.h - found -- Looking for string.h -- Looking for string.h - found -- Looking for winsock2.h -- Looking for winsock2.h - not found -- Looking for ftw.h -- Looking for ftw.h - found -- Looking for libgen.h -- Looking for libgen.h - found -- Looking for execinfo.h -- Looking for execinfo.h - found -- Looking for dirent.h -- Looking for dirent.h - found -- Looking for time.h -- Looking for time.h - found -- Looking for dlfcn.h -- Looking for dlfcn.h - found -- Looking for isfinite -- Looking for isfinite - found -- Looking for isnan -- Looking for isnan - found -- Looking for isinf -- Looking for isinf - found -- Looking for st_blksize -- Looking for st_blksize - not found -- Looking for alloca -- Looking for alloca - found -- Looking for snprintf -- Looking for snprintf - found -- Check size of char -- Check size of char - done -- Check size of double -- Check size of double - done -- Check size of float -- Check size of float - done -- Check size of int -- Check size of int - done -- Check size of uint -- Check size of uint - done -- Check size of schar -- Check size of schar - failed -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of off_t -- Check size of off_t - done -- Check size of off64_t -- Check size of off64_t - done -- Check size of short -- Check size of short - done -- Check size of ushort -- Check size of ushort - done -- Check size of _Bool -- Check size of _Bool - done -- Check size of size_t -- Check size of size_t - done -- Check size of ssize_t -- Check size of ssize_t - done -- Check size of ptrdiff_t -- Check size of ptrdiff_t - done -- Check size of uintptr_t -- Check size of uintptr_t - done -- Check size of __int64 -- Check size of __int64 - failed -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint64 -- Check size of uint64 - failed -- Check size of unsigned char -- Check size of unsigned char - done -- Check size of unsigned short int -- Check size of unsigned short int - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of long long -- Check size of long long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of uint64_t -- Check size of uint64_t - done -- Looking for fsync -- Looking for fsync - found -- Looking for strlcat -- Looking for strlcat - found -- Looking for strdup -- Looking for strdup - found -- Looking for strndup -- Looking for strndup - found -- Looking for strtoll -- Looking for strtoll - found -- Looking for strcasecmp -- Looking for strcasecmp - found -- Looking for strtoull -- Looking for strtoull - found -- Looking for mkstemp -- Looking for mkstemp - found -- Looking for mktemp -- Looking for mktemp - found -- Looking for random -- Looking for random - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for MPI_Comm_f2c -- Looking for MPI_Comm_f2c - found -- Looking for MPI_Info_f2c -- Looking for MPI_Info_f2c - found -- Looking for memmove -- Looking for memmove - found -- Looking for getpagesize -- Looking for getpagesize - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for getrlimit -- Looking for getrlimit - found -- Looking for _filelengthi64 -- Looking for _filelengthi64 - not found -- Looking for mmap -- Looking for mmap - found -- Looking for mremap -- Looking for mremap - found -- Looking for fileno -- Looking for fileno - found -- Looking for clock_gettime -- Looking for clock_gettime - found -- Looking for struct timespec -- Looking for struct timespec - not found -- Looking for atexit -- Looking for atexit - found -- Performing Test HAVE_MAPANON -- Performing Test HAVE_MAPANON - Success -- Found m4: /usr/bin/m4 -- Found bash: /usr/bin/bash -- CMAKE_SOURCE_DIR=/build/netcdf-openmpi/src/netcdf-c-4.9.2 -- CMAKE_BINARY_DIR=/build/netcdf-openmpi/src/build -- CMAKE_CURRENT_SOURCE_DIR=/build/netcdf-openmpi/src/netcdf-c-4.9.2/nc_test -- CMAKE_CURRENT_BINARY_DIR=/build/netcdf-openmpi/src/build/nc_test Configuration Summary: -- Building Shared Libraries: ON -- Building netCDF-4: ON -- Building DAP2 Support: ON -- Building DAP4 Support: ON -- Building Byte-range Support: ON -- Building Utilities: ON Building Parallel NetCDF -- Using PnetCDF: OFF -- Using Parallel IO: ON Tests Enabled: ON -- DAP Remote Tests: ON -- Extra Tests: ON -- Coverage Tests: OFF -- Parallel Tests: ON -- Large File Tests: ON -- Extreme Numbers: ON -- Unit Tests: ON Compiler: -- Build Type: RELEASE -- CMAKE_C_COMPILER: /usr/bin/mpicc -- CMAKE_C_FLAGS: -march=i686 -mtune=generic -O2 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=3 -Wformat -Werror=format-security -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -g -ffile-prefix-map=/build/netcdf-openmpi/src=/usr/src/debug/netcdf-openmpi -flto=auto -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -- CMAKE_C_FLAGS_RELEASE: -O3 -DNDEBUG -- Linking against: /usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;/usr/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.a;/usr/lib/libm.so;/usr/lib/libzstd.so;/usr/lib/libbz2.so;/usr/lib/libcurl.so;/usr/lib/libxml2.so -- # NetCDF C Configuration Summary ============================== # General ------- NetCDF Version: 4.9.2 Dispatch Version: 5 Configured On: Mon Sep 9 20:20:48 UTC 2024 Host System: i686-Linux-6.10.1-heartawoo Build Directory: /build/netcdf-openmpi/src/build Install Prefix: /usr Plugin Install Prefix: N.A. # Compiling Options ----------------- C Compiler: /usr/bin/mpicc CFLAGS: -march=i686 -mtune=generic -O2 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=3 -Wformat -Werror=format-security -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -g -ffile-prefix-map=/build/netcdf-openmpi/src=/usr/src/debug/netcdf-openmpi -flto=auto -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O3 -DNDEBUG CPPFLAGS: LDFLAGS: -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-z,pack-relative-relocs -flto=auto AM_CFLAGS: AM_CPPFLAGS: AM_LDFLAGS: Shared Library: yes Static Library: no Extra libraries: -lhdf5_hl -lhdf5 -lsz -lz -ldl -lm -lzstd -lbz2 -lcurl -lxml2 XML Parser: libxml2 # Features -------- Benchmarks: no NetCDF-2 API: yes HDF4 Support: no HDF5 Support: yes NetCDF-4 API: yes CDF5 Support: no NC-4 Parallel Support: yes PnetCDF Support: no DAP2 Support: yes DAP4 Support: yes Byte-Range Support: yes S3 Support: no NCZarr Support: yes NCZarr Zip Support: no Diskless Support: yes MMap Support: yes JNA Support: no ERANGE Fill Support: yes Relaxed Boundary Check: yes Multi-Filter Support: yes Quantization: yes Logging: no SZIP Write Support: yes Standard Filters: deflate szip zstd bz2 ZSTD Support: yes Parallel Filters: yes -- Configuring done (19.2s) -- Generating done (1.3s) -- Build files have been written to: /build/netcdf-openmpi/src/build make: Entering directory '/build/netcdf-openmpi/src/build' [ 0%] Building C object libdispatch/CMakeFiles/dispatch.dir/dcopy.c.o [ 0%] Building C object libdispatch/CMakeFiles/dispatch.dir/dfile.c.o [ 0%] Building C object libdispatch/CMakeFiles/dispatch.dir/ddim.c.o [ 0%] Building C object libdispatch/CMakeFiles/dispatch.dir/datt.c.o [ 0%] Building C object libdispatch/CMakeFiles/dispatch.dir/dattinq.c.o [ 0%] Building C object libdispatch/CMakeFiles/dispatch.dir/dattput.c.o [ 1%] Building C object libdispatch/CMakeFiles/dispatch.dir/dattget.c.o [ 1%] Building C object libdispatch/CMakeFiles/dispatch.dir/derror.c.o [ 1%] Building C object libdispatch/CMakeFiles/dispatch.dir/dvar.c.o [ 1%] Building C object libdispatch/CMakeFiles/dispatch.dir/dvarget.c.o [ 1%] Building C object libdispatch/CMakeFiles/dispatch.dir/dvarput.c.o [ 1%] Building C object libdispatch/CMakeFiles/dispatch.dir/dvarinq.c.o [ 1%] Building C object libdispatch/CMakeFiles/dispatch.dir/ddispatch.c.o In file included from /build/netcdf-openmpi/src/netcdf-c-4.9.2/libdispatch/ddispatch.c:13: /build/netcdf-openmpi/src/netcdf-c-4.9.2/libdispatch/ddispatch.c: In function ‘NCDISPATCH_initialize’: /build/netcdf-openmpi/src/netcdf-c-4.9.2/include/ncpathmgr.h:199:27: warning: ignoring return value of ‘getcwd’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | #define NCgetcwd(buf,len) getcwd(buf,len) | ^~~~~~~~~~~~~~~ /build/netcdf-openmpi/src/netcdf-c-4.9.2/libdispatch/ddispatch.c:91:13: note: in expansion of macro ‘NCgetcwd’ 91 | NCgetcwd(home,MAXPATH); | ^~~~~~~~ /build/netcdf-openmpi/src/netcdf-c-4.9.2/include/ncpathmgr.h:199:27: warning: ignoring return value of ‘getcwd’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | #define NCgetcwd(buf,len) getcwd(buf,len) | ^~~~~~~~~~~~~~~ /build/netcdf-openmpi/src/netcdf-c-4.9.2/libdispatch/ddispatch.c:104:15: note: in expansion of macro ‘NCgetcwd’ 104 | (void)NCgetcwd(cwdbuf,sizeof(cwdbuf)); | ^~~~~~~~ [ 1%] Building C object libdispatch/CMakeFiles/dispatch.dir/nclog.c.o [ 2%] Building C object libdispatch/CMakeFiles/dispatch.dir/dstring.c.o [ 2%] Building C object libdispatch/CMakeFiles/dispatch.dir/dutf8.c.o [ 2%] Building C object libdispatch/CMakeFiles/dispatch.dir/dinternal.c.o [ 2%] Building C object libdispatch/CMakeFiles/dispatch.dir/doffsets.c.o [ 2%] Building C object libdispatch/CMakeFiles/dispatch.dir/ncuri.c.o [ 2%] Building C object libdispatch/CMakeFiles/dispatch.dir/nclist.c.o [ 2%] Building C object libdispatch/CMakeFiles/dispatch.dir/ncbytes.c.o [ 2%] Building C object libdispatch/CMakeFiles/dispatch.dir/nchashmap.c.o [ 3%] Building C object libdispatch/CMakeFiles/dispatch.dir/nctime.c.o [ 3%] Building C object libdispatch/CMakeFiles/dispatch.dir/nc.c.o [ 3%] Building C object libdispatch/CMakeFiles/dispatch.dir/nclistmgr.c.o [ 3%] Building C object libdispatch/CMakeFiles/dispatch.dir/utf8proc.c.o [ 3%] Building C object libdispatch/CMakeFiles/dispatch.dir/dpathmgr.c.o /build/netcdf-openmpi/src/netcdf-c-4.9.2/libdispatch/dpathmgr.c: In function ‘getwdpath’: /build/netcdf-openmpi/src/netcdf-c-4.9.2/libdispatch/dpathmgr.c:1121:9: warning: ignoring return value of ‘getcwd’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1121 | getcwd(wdprefix, sizeof(wdprefix)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 3%] Building C object 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7%] Building C object libsrc/CMakeFiles/netcdf3.dir/attr.c.o [ 7%] Building C object libsrc/CMakeFiles/netcdf3.dir/nc3dispatch.c.o [ 7%] Building C object libsrc/CMakeFiles/netcdf3.dir/nc3internal.c.o [ 7%] Building C object libsrc/CMakeFiles/netcdf3.dir/var.c.o [ 8%] Building C object libsrc/CMakeFiles/netcdf3.dir/dim.c.o [ 8%] Building C object libsrc/CMakeFiles/netcdf3.dir/ncx.c.o [ 8%] Building C object libsrc/CMakeFiles/netcdf3.dir/lookup3.c.o [ 8%] Building C object libsrc/CMakeFiles/netcdf3.dir/ncio.c.o [ 8%] Building C object libsrc/CMakeFiles/netcdf3.dir/memio.c.o [ 8%] Building C object libsrc/CMakeFiles/netcdf3.dir/mmapio.c.o /build/netcdf-openmpi/src/netcdf-c-4.9.2/libsrc/mmapio.c: In function ‘mmapio_create’: /build/netcdf-openmpi/src/netcdf-c-4.9.2/libsrc/mmapio.c:252:9: warning: ignoring return value of ‘write’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 252 | write(fd,"",1); | ^~~~~~~~~~~~~~ /build/netcdf-openmpi/src/netcdf-c-4.9.2/libsrc/mmapio.c: In function ‘mmapio_pad_length’: /build/netcdf-openmpi/src/netcdf-c-4.9.2/libsrc/mmapio.c:439:9: warning: ignoring return value of ‘write’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 439 | write(mmapio->mapfd,"",mmapio->alloc); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 8%] Building C object libsrc/CMakeFiles/netcdf3.dir/posixio.c.o [ 8%] Building C object libsrc/CMakeFiles/netcdf3.dir/httpio.c.o [ 8%] Built target netcdf3 [ 8%] Built target manpage [ 9%] Building C object libsrc4/CMakeFiles/netcdf4.dir/nc4dispatch.c.o [ 9%] Building C object libsrc4/CMakeFiles/netcdf4.dir/nc4attr.c.o [ 9%] Building C object libsrc4/CMakeFiles/netcdf4.dir/nc4dim.c.o [ 9%] Building C object libsrc4/CMakeFiles/netcdf4.dir/nc4grp.c.o [ 9%] Building C object libsrc4/CMakeFiles/netcdf4.dir/nc4internal.c.o [ 9%] Building C object libsrc4/CMakeFiles/netcdf4.dir/nc4type.c.o [ 9%] Building C object libsrc4/CMakeFiles/netcdf4.dir/nc4var.c.o [ 9%] Building C object 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libncpoco/CMakeFiles/ncpoco.dir/cp_unix.c.o [ 19%] Built target ncpoco [ 19%] Building C object libnczarr/CMakeFiles/nczarr.dir/zarr.c.o [ 20%] Building C object libnczarr/CMakeFiles/nczarr.dir/zattr.c.o [ 20%] Building C object libnczarr/CMakeFiles/nczarr.dir/zxcache.c.o [ 20%] Building C object libnczarr/CMakeFiles/nczarr.dir/zchunking.c.o [ 20%] Building C object libnczarr/CMakeFiles/nczarr.dir/zclose.c.o [ 20%] Building C object libnczarr/CMakeFiles/nczarr.dir/zcreate.c.o [ 20%] Building C object libnczarr/CMakeFiles/nczarr.dir/zcvt.c.o [ 20%] Building C object libnczarr/CMakeFiles/nczarr.dir/zdim.c.o [ 20%] Building C object libnczarr/CMakeFiles/nczarr.dir/zdispatch.c.o [ 21%] Building C object libnczarr/CMakeFiles/nczarr.dir/zfile.c.o [ 21%] Building C object libnczarr/CMakeFiles/nczarr.dir/zfilter.c.o [ 21%] Building C object libnczarr/CMakeFiles/nczarr.dir/zgrp.c.o [ 21%] Building C object libnczarr/CMakeFiles/nczarr.dir/zinternal.c.o [ 21%] Building C object libnczarr/CMakeFiles/nczarr.dir/zmap.c.o [ 21%] Building C object libnczarr/CMakeFiles/nczarr.dir/zmap_file.c.o [ 21%] Building C object libnczarr/CMakeFiles/nczarr.dir/zodom.c.o [ 21%] Building C object libnczarr/CMakeFiles/nczarr.dir/zopen.c.o [ 22%] Building C object libnczarr/CMakeFiles/nczarr.dir/zprov.c.o [ 22%] Building C object libnczarr/CMakeFiles/nczarr.dir/zsync.c.o [ 22%] Building C object libnczarr/CMakeFiles/nczarr.dir/ztype.c.o [ 22%] Building C object libnczarr/CMakeFiles/nczarr.dir/zutil.c.o [ 22%] Building C object libnczarr/CMakeFiles/nczarr.dir/zvar.c.o [ 22%] Building C object libnczarr/CMakeFiles/nczarr.dir/zwalk.c.o [ 22%] Building C object libnczarr/CMakeFiles/nczarr.dir/zdebug.c.o [ 22%] Built target nczarr [ 22%] Building C object liblib/CMakeFiles/netcdf.dir/nc_initialize.c.o [ 22%] Linking C shared library libnetcdf.so In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:74:6, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:196:31: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:82:6, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:197:31: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:86:6, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:198:31: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:62:13, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:201:31: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:115:6, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:202:31: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:135:13, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:203:31: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:138:13, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:203:31: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:97:9, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:204:31: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:100:2, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:205:31: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:156:2, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:211:15: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:163:6, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:215:15: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:165:6, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:215:15: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:167:6, inlined from ‘NCD4_set_flags_perlink’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:215:15: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] In function ‘set_curlopt’, inlined from ‘set_curlflag’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:82:6, inlined from ‘NCD4_curl_debug’ at /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:290:5: /usr/src/debug/netcdf-openmpi/netcdf-c-4.9.2/libdap4/d4curlfunctions.c:43:13: warning: call to ‘_curl_easy_setopt_err_long’ declared with attribute warning: curl_easy_setopt expects a long argument for this option [-Wattribute-warning] [ 22%] Built target netcdf [ 22%] Building C object plugins/CMakeFiles/h5misc.dir/H5Zmisc.c.o [ 22%] Building C object plugins/CMakeFiles/h5misc.dir/H5Zutil.c.o [ 22%] Linking C shared module lib__nch5misc.so [ 22%] Built target h5misc [ 22%] Building C object plugins/CMakeFiles/h5noop.dir/H5Znoop.c.o [ 22%] Building C object plugins/CMakeFiles/h5noop.dir/H5Zutil.c.o [ 22%] Linking C shared module lib__nch5noop.so [ 22%] Built target h5noop [ 22%] Building C object plugins/CMakeFiles/h5noop1.dir/H5Znoop1.c.o [ 23%] Building C object plugins/CMakeFiles/h5noop1.dir/H5Zutil.c.o [ 23%] Linking C shared module lib__nch5noop1.so [ 23%] Built target h5noop1 [ 24%] Building C object plugins/CMakeFiles/h5unknown.dir/H5Zunknown.c.o [ 24%] Linking C shared module lib__nch5unknown.so [ 24%] Built target h5unknown [ 24%] Building C object plugins/CMakeFiles/h5shuffle.dir/H5Zshuffle.c.o [ 24%] Linking C shared module lib__nch5shuffle.so [ 24%] Built target h5shuffle [ 24%] Building C object plugins/CMakeFiles/h5fletcher32.dir/H5Zfletcher32.c.o [ 24%] Building C object plugins/CMakeFiles/h5fletcher32.dir/H5checksum.c.o [ 25%] Linking C shared module lib__nch5fletcher32.so [ 25%] Built target h5fletcher32 [ 25%] Building C object plugins/CMakeFiles/h5deflate.dir/H5Zdeflate.c.o [ 25%] Linking C shared module lib__nch5deflate.so [ 25%] Built target h5deflate [ 25%] Building C object plugins/CMakeFiles/nczmisc.dir/NCZmisc.c.o [ 25%] Linking C shared module lib__nczmisc.so [ 25%] Built target nczmisc [ 25%] Building C object plugins/CMakeFiles/nczhdf5filters.dir/NCZhdf5filters.c.o [ 26%] Linking C shared module lib__nczhdf5filters.so [ 26%] Built target nczhdf5filters [ 26%] Building C object plugins/CMakeFiles/nczstdfilters.dir/NCZstdfilters.c.o [ 26%] Linking C shared module lib__nczstdfilters.so [ 26%] Built target nczstdfilters [ 26%] Building C object plugins/CMakeFiles/h5zstd.dir/H5Zzstd.c.o [ 26%] Linking C shared module lib__nch5zstd.so [ 26%] Built target h5zstd [ 26%] Building C object plugins/CMakeFiles/h5szip.dir/H5Zszip.c.o [ 26%] Linking C shared module lib__nch5szip.so [ 26%] Built target h5szip [ 26%] Building C object plugins/CMakeFiles/h5bzip2.dir/H5Zbzip2.c.o [ 26%] Linking C shared module lib__nch5bzip2.so [ 26%] Built target h5bzip2 [ 27%] Building C object ncgen/CMakeFiles/ncgen.dir/bindata.c.o [ 27%] Building C object ncgen/CMakeFiles/ncgen.dir/bytebuffer.c.o [ 27%] Building C object ncgen/CMakeFiles/ncgen.dir/cdata.c.o [ 27%] Building C object ncgen/CMakeFiles/ncgen.dir/cvt.c.o [ 27%] Building C object ncgen/CMakeFiles/ncgen.dir/data.c.o [ 27%] Building C object ncgen/CMakeFiles/ncgen.dir/debug.c.o [ 27%] Building C object ncgen/CMakeFiles/ncgen.dir/dump.c.o [ 27%] Building C object ncgen/CMakeFiles/ncgen.dir/escapes.c.o [ 28%] Building C object ncgen/CMakeFiles/ncgen.dir/f77data.c.o [ 28%] Building C object ncgen/CMakeFiles/ncgen.dir/genbin.c.o [ 28%] Building C object ncgen/CMakeFiles/ncgen.dir/genc.c.o [ 28%] Building C object ncgen/CMakeFiles/ncgen.dir/genchar.c.o [ 28%] Building C object ncgen/CMakeFiles/ncgen.dir/generate.c.o [ 28%] Building C object ncgen/CMakeFiles/ncgen.dir/generr.c.o [ 28%] Building C object ncgen/CMakeFiles/ncgen.dir/genf77.c.o [ 28%] Building C object ncgen/CMakeFiles/ncgen.dir/genj.c.o [ 29%] Building C object ncgen/CMakeFiles/ncgen.dir/genlib.c.o [ 29%] Building C object ncgen/CMakeFiles/ncgen.dir/getfill.c.o [ 29%] Building C object ncgen/CMakeFiles/ncgen.dir/jdata.c.o [ 29%] Building C object ncgen/CMakeFiles/ncgen.dir/list.c.o [ 29%] Building C object ncgen/CMakeFiles/ncgen.dir/main.c.o /build/netcdf-openmpi/src/netcdf-c-4.9.2/ncgen/main.c: In function ‘main’: /build/netcdf-openmpi/src/netcdf-c-4.9.2/ncgen/main.c:454:23: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 454 | (void)fread(bom,1,1,fp); | ^~~~~~~~~~~~~~~~~ [ 29%] Building C object ncgen/CMakeFiles/ncgen.dir/ncgeny.c.o ncgen.y: In function ‘ncgparse’: ncgen.y:378:59: error: passing argument 2 of ‘ncaux_class_alignment’ from incompatible pointer type [-Wincompatible-pointer-types] 378 | (void)ncaux_class_alignment(NC_OPAQUE,&$5->typ.alignment); | ^~~~~~~~~~~~~~~~~~~~ | | | long unsigned int * In file included from /build/netcdf-openmpi/src/netcdf-c-4.9.2/ncgen/includes.h:46, from ncgen.y:15: /build/netcdf-openmpi/src/netcdf-c-4.9.2/include/netcdf_aux.h:78:56: note: expected ‘size_t *’ {aka ‘unsigned int *’} but argument is of type ‘long unsigned int *’ 78 | EXTERNL int ncaux_class_alignment(int ncclass, size_t* alignp); | ~~~~~~~~^~~~~~ ncgen.y:392:57: error: passing argument 2 of ‘ncaux_class_alignment’ from incompatible pointer type [-Wincompatible-pointer-types] 392 | (void)ncaux_class_alignment(NC_VLEN,&$5->typ.alignment); | ^~~~~~~~~~~~~~~~~~~~ | | | long unsigned int * /build/netcdf-openmpi/src/netcdf-c-4.9.2/include/netcdf_aux.h:78:56: note: expected ‘size_t *’ {aka ‘unsigned int *’} but argument is of type ‘long unsigned int *’ 78 | EXTERNL int ncaux_class_alignment(int ncclass, size_t* alignp); | ~~~~~~~~^~~~~~ ncgen.y: In function ‘makeprimitivetype’: ncgen.y:983:40: error: passing argument 2 of ‘ncaux_class_alignment’ from incompatible pointer type [-Wincompatible-pointer-types] 983 | (void)ncaux_class_alignment(nctype,&sym->typ.alignment); | ^~~~~~~~~~~~~~~~~~~ | | | long unsigned int * /build/netcdf-openmpi/src/netcdf-c-4.9.2/include/netcdf_aux.h:78:56: note: expected ‘size_t *’ {aka ‘unsigned int *’} but argument is of type ‘long unsigned int *’ 78 | EXTERNL int ncaux_class_alignment(int ncclass, size_t* alignp); | ~~~~~~~~^~~~~~ make[2]: *** [ncgen/CMakeFiles/ncgen.dir/build.make:370: ncgen/CMakeFiles/ncgen.dir/ncgeny.c.o] Error 1 make[1]: *** [CMakeFiles/Makefile2:2903: ncgen/CMakeFiles/ncgen.dir/all] Error 2 make: *** [Makefile:166: all] Error 2 make: Leaving directory '/build/netcdf-openmpi/src/build' ==> ERROR: A failure occurred in build(). Aborting... ==> ERROR: Build failed, check /var/lib/archbuild1/extra-staging-with-build-support-i686/builder1/build [?25h[?25hused straw: :with_build_support:haskell_without_check: builder1@arch32-builder3